BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB035F09LP1|AL430092
(917 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1468 1614 0.0
>3x_Contig1468
Length = 9852
Score = 1614 bits (810), Expect = 0.0
Identities = 871/888 (98%), Gaps = 8/888 (0%)
Strand = Plus / Minus
Query: 30 aatgctggtttagcatctgtaggcttgtcctccgtttttgaaccaaatgcagaatcctgt 89
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 1875 aatgctggtttagcatctgtaggcttgtcctccgtttttgaaccaaatg-agaatcctgt 1817
Query: 90 ctttgccgcctgaggttttttcttcaggttttgatcccagacttagcgaaaaacttggct 149
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1816 ctttgc-gcctgaggttttttcttcaggttttgatcccagacttagcgaaaaacttggct 1758
Query: 150 tgttggcatctccagcggcagaaccaaagttgaaccctgaagtagcaccggctggttttg 209
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1757 tgttggcatctccagcggcagaaccaaagttgaaccctgaagtagcaccggctggttttg 1698
Query: 210 tatcagtgtggttcccaccaaagagtgatgtggcatttgtattaggtttcgaggtttcag 269
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1697 tatcagtgtggttcccaccaaagagtgatgtggcatttgtattaggtttcgaggtttcag 1638
Query: 270 ttggtttagcggaagttgtgaagcttgatgttgaagttgtattggcaccaaatattggtt 329
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1637 ttggtttagcggaagttgtgaagcttgatgttgaagttgtattggcaccaaatattggtt 1578
Query: 330 tagaggcattgacactcggagttgtagtcattgcattatttccagatagtccgamattaa 389
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1577 tagaggcattgacactcggagttgtagtcattgcattatttccagatagtccgaaattaa 1518
Query: 390 magcgcggctttgcatcggtcttttgttcaggttgtgtaccaaatgagaatccactcttg 449
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1517 aagcg-ggctttgcatcggtcttttgttcaggttgtgtaccaaatgagaatccactcttg 1459
Query: 450 ggttgagtgtctttagcctgttgcgacccgccaaatagcgaagagctacttcctgctgct 509
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 1458 ggttgagtgtctttagcctgttgcgacccgccaaatagcgaagagctacttcctgc--ct 1401
Query: 510 cctacggagccaaagccaccaaatgttggttttgctgcgcttgtattcgtggtgttgctg 569
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1400 tctacggagccaaagccaccaaatgttggttttg--gcgcttgtattcgtggtgttgctg 1343
Query: 570 ttgttattgttcgcattgctggcagcatcgtttgcgttaaaacctccaaaagcaggtttt 629
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1342 ttgttattgttcgcattgctggcagcatcgtttgcgttaaaacctccaaaagcaggtttt 1283
Query: 630 ggtgcatcgcctgtwccagcagttgtattagaggcaccaaacgaaaatggcgaastgkct 689
|||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 1282 ggtgcatcgcctgtaccagcagttgtattagaggcaccaaacgaaaatggcgaagctgct 1223
Query: 690 gggcttgactgcattagcgccctgttgtgtattcataccaaagcctccgaatgcaggttt 749
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1222 -ggcttgactgcattagcgccctgttgtgtattcataccaaagcctccgaatgcaggttt 1164
Query: 750 tgtttgtccattgtcattggtagtggtcgctccaaacgctgaaaatgcatttccctgctg 809
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1163 tgtttgtccattgtcattggtagtggtcgctccaaacgctgaaaatgcatttccctgctg 1104
Query: 810 cgtattagagctaccagcagctgaaccgaaacttgcaaaagcattgccactggtctggcc 869
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1103 cgtattagagctaccagcagctgaaccgaaacttgcaaaagcattgccactggtctggcc 1044
Query: 870 tccagtattgccmaagagagaggaagcacctgtgctggtactggtgtt 917
|||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 1043 tccagtattgccaaagagagaggaagcacctgtgctggtactggtgtt 996
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5316
Number of Sequences: 1807
Number of extensions: 5316
Number of successful extensions: 45
Number of sequences better than 1.0e-20: 1
length of query: 917
length of database: 10,358,551
effective HSP length: 16
effective length of query: 901
effective length of database: 10,329,639
effective search space: 9307004739
effective search space used: 9307004739
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)